PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT43467.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 265aa    MW: 30407 Da    PI: 6.7145
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT43467.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.31e-1179124454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 +h+e+ErrRR+riNs +++Lr+ll  +      K +Ka+ L+k+v+ +++L
  PHT43467.1  79 NHKEAERRRRQRINSHLHTLRTLLSCN-----SKTDKASLLTKVVQRVREL 124
                 8***********************997.....7************999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MQQQDYFQEN FDFCQYLTKN KPSSSDHTNM MMGEYTYGFD IEGIKNFCSS SSIYPHHMEF  60
QETIENNNNN NTPEARAINH KEAERRRRQR INSHLHTLRT LLSCNSKTDK ASLLTKVVQR  120
VRELKEQTSK IMQSETNFPS ETDEITVLSS NDCLEDGRSL IKASLCCEDR LNLIPDLIET  180
LKSLGLSPLR AELVTLGGRI RNVVILAVDH RKESNNNSTD DDAEEEESLL LLRDALRSII  240
QRSSYGSTGE RGKKRRVLKH GTTNY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17688RAINHKEAERRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.11e-48bHLH family protein