PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT43461.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family E2F/DP
Protein Properties Length: 208aa    MW: 23094.1 Da    PI: 8.1727
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT43461.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP88.64.3e-2844126271
     E2F_TDP   2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                 ++++Lr++++k   ++ek+e+ g++t+neva+eLv+e                d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  PHT43461.1  44 SGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfsdasnslacpdqkqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 126
                 689********...*****999*******************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MATPASDSTF LRLNNLDIHA DDAGSQGTAG KKKRAQRATG GDKSGRGLRQ FSMKVCEKVE  60
SKGRTTYNEV ADELVAEFSD ASNSLACPDQ KQYDEKNIRR RVYDALNVLM AMDIISKDKK  120
EIQWKGLPRT DANDIEELKT ERLSLRNRIE KKAAYLEELE EQYVGLQNLI KRNEQLYGSG  180
NAPSGGVALP FILVQVNAQQ SSIVIGIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-102E2F/DP family protein