PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT43448.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 216aa MW: 24240.9 Da PI: 4.1791 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 25.4 | 3.5e-08 | 2 | 25 | 32 | 55 |
AP2 32 slgkfgtaeeAakaaiaarkkleg 55 +lg+f taeeAa+a+++a+ l+g PHT43448.1 2 WLGTFETAEEAARAYDQAACLLRG 25 9******************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MWLGTFETAE EAARAYDQAA CLLRGSNTRT NFVTTRVSSD SQLAYRIRNL LDSKKSSSTC 60 STGSIVHSVS GAKIQESHEK VVSSCDDDEI TIQENQLYKP TTTTMTIAVS AEFQTSCDRL 120 YESSLTNTED LYKPDMMSCS SSCSWGFEYA QELLDFPILD ESRGEMGYTE FERMKVERQI 180 SASLYAVNGV QEYMENVHDL DDLSLWDLPP LCSLLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 2e-13 | ERF family protein |