PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT43390.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 422aa    MW: 47485.5 Da    PI: 5.2562
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT43390.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.5e-19189238255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+g
  PHT43390.1 189 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEDAAMAYDREAYKLRG 238
                 59******9.**********965...5*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    
MAAPENSGKS MMAMAEEHID FDDNTFERQQ RRPVFEEASM SNRRFKKIKS PERHAYSQSS  60
VQQSPSQSSV TYNNPTSMAF PPPPSSSRLV FPFSYDGTQQ SNATPMFHPQ QQNQQQMISF  120
SPPQCLYPPY FAGELGPSQN QQQLLQYWNE TLNLSPRGRM MMMSRLGQDS RGYFRPQQLQ  180
VQPISATKLY RGVRQRHWGK WVAEIRLPKN RTRLWLGTFD TAEDAAMAYD REAYKLRGDN  240
AKLNFPELFI GKDRGEASTA TNSSPSSPIT PHESSLPQQI SESVELQPIN NELLPPPLPP  300
PPQPPPEGDN HDEESGIGSS EVTTSENLES FGVIEGSASS SQSSELVWGD MAEAWFNAIP  360
AGWGPGSPVW DDLDANNNLM FPPNLHFGNF HQPEPHNPDP HQHHDNTNRD PSSPSCPMRP  420
FF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.17e-52ERF family protein