PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT42984.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 513aa MW: 56855.4 Da PI: 7.1121

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT42984.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	54.2	2.7e-17	333	379	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L++llP++ +K +Ka++L +A+eY+ksLq PHT42984.1 333 VHNLSERRRRDRINEKMKALQDLLPHS-----TKTDKASMLDEAIEYLKSLQ 379 6***********************9.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
MNPCLPEWNI EAEQPVPHQK KPMGFDHELV ELLWRNGEVV LHSQTHKKQP GYDPNECRHF 60 DKHVQPTIRV AGDQTNLLQD DETVSWLNCP MDDSFDKVFC SPFLSDISTA PLREADKSIR 120 QSEDNKVFKF DPLEINHVLP QSHHSGFDSN PMPPPRFNNF GSAQQQHHIG GNQKGVNFPP 180 PVRSSNMQLG GKEARSNLML QDIKEGSVMT VGSSHCGSNQ VAVDADTSRF SSSANRGLSA 240 ALITDYTGKI SPQSDTMDRD TFEPANTSSS GGSGSSYARA CNQPTATNSQ NHKRKSRDGE 300 EPECQSKADG LESTGGNKAQ KSGTARRSRA AEVHNLSERR RRDRINEKMK ALQDLLPHST 360 KTDKASMLDE AIEYLKSLQM QLQMMWMGSG MASLMFPGVQ HYMSRMGMGI SPQTVPSIHN 420 AMHLARLPLV DPSIPLTQAA PNQAAMCQNS MLNQVNYQRH LQNPNFQDQY ASYMGFHPLQ 480 GASQPMNIFG LGSHTTQQSQ QLPHPTNSNA PTT

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

MNPCLPEWNI EAEQPVPHQK KPMGFDHELV ELLWRNGEVV LHSQTHKKQP GYDPNECRHF  60
DKHVQPTIRV AGDQTNLLQD DETVSWLNCP MDDSFDKVFC SPFLSDISTA PLREADKSIR  120
QSEDNKVFKF DPLEINHVLP QSHHSGFDSN PMPPPRFNNF GSAQQQHHIG GNQKGVNFPP  180
PVRSSNMQLG GKEARSNLML QDIKEGSVMT VGSSHCGSNQ VAVDADTSRF SSSANRGLSA  240
ALITDYTGKI SPQSDTMDRD TFEPANTSSS GGSGSSYARA CNQPTATNSQ NHKRKSRDGE  300
EPECQSKADG LESTGGNKAQ KSGTARRSRA AEVHNLSERR RRDRINEKMK ALQDLLPHST  360
KTDKASMLDE AIEYLKSLQM QLQMMWMGSG MASLMFPGVQ HYMSRMGMGI SPQTVPSIHN  420
AMHLARLPLV DPSIPLTQAA PNQAAMCQNS MLNQVNYQRH LQNPNFQDQY ASYMGFHPLQ  480
GASQPMNIFG LGSHTTQQSQ QLPHPTNSNA PTT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	338	343	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43010.2	3e-52	bHLH family protein