PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHT42787.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 848aa MW: 97585.3 Da PI: 6.949 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 85.3 | 9.8e-27 | 90 | 192 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 fY+eYA+++GF++ +++s++sk+++e+++++f Cs++g+++e +k+ e++ +ra +t+Cka+++vk++ dgkw ++++e+eHnH PHT42787.1 90 FYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYEKSanrprsrqgnkqdPENATGRRACAKTDCKASMHVKRRPDGKWIIHRFEKEHNH 188 9***************************************999999899999888776555556699******************************** PP FAR1 88 elap 91 el p PHT42787.1 189 ELLP 192 *975 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 848 aa Download sequence |
MDIDLRLPSQ DHDKEEEEEQ NGIINMLDNE EKMHSDDGMH GILVIEEKMH AEDGGDMNTP 60 IGTMIEFKED VNLEPLAGME FESHGEAYAF YQEYARSMGF NTAIQNSRRS KTSREFIDAK 120 FACSRYGTKR EYEKSANRPR SRQGNKQDPE NATGRRACAK TDCKASMHVK RRPDGKWIIH 180 RFEKEHNHEL LPAQAVSEQT RRMYAAMARQ FAEYKNVVGL KSDTKGPFEK GRNSAMEGGD 240 INVLLEFFIQ MQNLNSNFFY AVDVGEDQRV RNLFWVDAKA RHDYANFNDV VSFDTAYVRN 300 KYKMPLALFV GVNQHFQFML LGCALVSDES AATFFWVMRT WLKAMGGQAP KTVITDHDQV 360 LKSVIPEALP LSLHYFCLWH ILGKVSETLN HIIKQNEKFM PKFEKCIHRS WTDEEFEKRW 420 RKLVDKFDLR EAELIHSLYE DRMKWAPTFI RDVLLAGMSM VQRSESVNSF FDKYVHKKTT 480 VQELVKQYES ILQDRYEEEA KADSDTWNKQ PALKSPSPFE KQVAGLYTNA VFKKFQAEVL 540 GAVACIPKRE KQDATTITYR VQDFEKTQEF IVTLDEMKSE ISCLCHLFEF KGYLCRHTLI 600 VLQICRVSSI PSQYILKRWK KDAKSKYSMT DGSEDLQSRF QRYNELCYRA MKLSEEGSLS 660 QESYSFALRA LDDAFGSCVT FNNSNKNMLE AGTSSASGIL CIEDDNQSRS MSKTNKKKNN 720 FTKKRKVNSE PDVMAVGPAD SLQQMDKLNS RPVTLDGYFG PQQSVQGMVQ LNLMAPTRDN 780 YYGNQQTIQG LGQLNSIAPT HDGYYGAQPT MHGLGQMDFF RTPSFSYGIR DEPNVRSAQL 840 HDETSRHP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G22170.2 | 0.0 | FAR1 family protein |