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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | PHT42669.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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| Family | FAR1 | ||||||||
| Protein Properties | Length: 1232aa MW: 136948 Da PI: 7.5328 | ||||||||
| Description | FAR1 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | FAR1 | 38.1 | 5e-12 | 30 | 107 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91
fY+e+++ +GF v+k++ kk g+i++ tf C k++ ++ +++r++Cka+++ + ++dg v+k+ l+HnHel p
PHT42669.1 30 FYKEHSHLTGFGVVKKSAKKL--AGQIKNITFGCDTCPKTTARN----------QSKRVDCKARVNYHVMNDGSSIVAKVILDHNHELEP 107
9***************98887..999********9877766654..........569******************************975 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 1232 aa Download sequence |
MHDNSYTDEQ YTAGPAEGMF FGIVQIAFVF YKEHSHLTGF GVVKKSAKKL AGQIKNITFG 60 CDTCPKTTAR NQSKRVDCKA RVNYHVMNDG SSIVAKVILD HNHELEPAVL HFLPCHRKLS 120 RTLKKSLAAH DITGLRPSKI IRLLENLAYD HGQNPSTAIL TNQCKSIKVA ICEVLPNTIH 180 RVYVVRLPYC EIERHVDFDA VEGVEVFIQC MPHTRSSGQP LLPINPEPQR IGRMKAQAEI 240 ERMTAQQQQA RLAALAAAQV QQQNIDNPAR ATNPDDEDLG DDELLNPRHD AEIATPANRR 300 GCQARFRYDR QPMQPAFDDD DDDLDGAGAT GAIIPPPLAP GAKFNITSTM IQLLQLKGLF 360 GGLAGDDPNM HLINFISTCK SFDNPGVGQN AIRLRLFPLS LSGEATLWLN GLTPDSITNW 420 RQLRDAFLER FFPPSKRAQL RDEISNFRQL PTEALHETWE RFKTKLARCP NHHMTNVHLM 480 EILYRALNSI TKPVVDNAAG GSFMDLTFGQ ASNMLDRMTK QSRAWHTRDS EVASPTLSIG 540 MTADQRRREE ERDQDMAHMK TQVDLLTKHL LSGKTEKVKA VASKGRDESD SEEEANYLNN 600 QGGFRGNTQG NQGRNYYDKS GNKDQGSWKN KNEKSGLYVP PGRCDTSTSN SISMEDMMAK 660 ILKGVEATSA GVTEVVNDLS SMKQLVDSHS TLIKQIEQQL SQLSAALNQR KAGTLPSDTV 720 QNPRNEGSCM AITTRSGKVL ETSAKGKQVV DEVADLDDNA KGKDAAAPTP DVKDASPSVV 780 QPEKSEKRKQ EEKKTVERTL PYPPPPFPQR LKKVADDTKF SKFITMLNQL IINVPLVEAL 840 EQMPGYAKFM KDLLTKKRAA SYELREDVHH CSEIATRSIV QKKADPGAFT IPCTVGSLNF 900 AKALCDLGAS INLMPLSIYK KLGLGDPTPT NMRLVMADRS VKRPVGILCD VLVKVSLFIF 960 PADFVILDCE ADSEVPIILG RPFLVTGSVL IDLRANDLSF RINDEVVRFD VCKSMKQPKD 1020 LSVFSVADVF FDDEKELLEQ EQIIDDPLAV VLMNGENEDA ENSEKATSKP SIEEPPTLEL 1080 KELPSHLKYA FLGSRNTLPV IVAADLGEQQ VAALIAILRK YIRAIGWTIA DIIGIPPGIC 1140 THKIQLQENC TPTIEHQRRL NPPMQEVVKK EIIKWLDAGV VYPISDSTWV SPVQCVPKKR 1200 GMTVVANAKN ELVPLRPVTG RRVCRDYRKL NS |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G15090.1 | 3e-07 | FAR1 family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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