PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT42323.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

ARR-B

Protein Properties

Length: 670aa MW: 73885.5 Da PI: 7.1866

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT42323.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	76.4	3.8e-24	205	259	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ..kYRl 55 +r++W+ eLH++Fv av qL G+ekA+Pk+il+lm+v+ Lt+e+v+SHLQ kYRl PHT42323.1 205 ARVVWSIELHRKFVAAVGQL-GIEKAVPKRILDLMNVDRLTRENVASHLQalKYRL 259 79****************.***************************888997 PP
2	Myb_DNA-binding	27.3	8.6e-09	206	255	1	47
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqky 47 r W+ e++ ++v av qlG + +k+I m+ ++t++++ s++q + PHT42323.1 206 RVVWSIELHRKFVAAVGQLGIEkaVPKRILDLMNvDRLTRENVASHLQAL 255 678********************************************976 PP
3	Response_reg	79	1.7e-26	22	130	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl vdD+p ++ll ++l+k +y +v+++++++ al++l+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++++++ ++ + ++ Ga PHT42323.1 22 VLAVDDNPPCLMLLDSLLRKCQY-QVTTTSQARMALKMLRENKdrFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSGNSDTRLVMKGISHGAC 116 799******************.***********888889***************87754.558******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l+Kp+ +eel++ PHT42323.1 117 DYLVKPVRIEELRN 130 **********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 670 aa Download sequence
MTVEEIRGNM GGGDNFPIGM RVLAVDDNPP CLMLLDSLLR KCQYQVTTTS QARMALKMLR 60 ENKDRFDLVI SDVHMPDMDG FKLLELVGLE MDLPVIMLSG NSDTRLVMKG ISHGACDYLV 120 KPVRIEELRN IWQHVIRRKK VEPKTQSKSN NHVKSNHESG ESGRGQSPTG NADHNGKCNK 180 KRKDEEDEND ENGNDNEDPT TQKRARVVWS IELHRKFVAA VGQLGIEKAV PKRILDLMNV 240 DRLTRENVAS HLQALKYRLY LKRINSVQTQ QANMVAALGG RDFVRMGSLD GLGDFRTLGG 300 SGRYTHAALS SYSSGGMLGR LNSAAGLTIR NLTASQLLQP SHGQNLSNPV NAFTKMEPNI 360 PPASQNASIF QGIPASLELD QLQKTKSTSH IPLDESRLLT SDVLGCSNNS LSNVPNNPML 420 LQGNPLQPPT GGGFGNQHSP NMTPFSSDSF NTGVNGSNFL EHGQNSVQLS KFQSSSFPLT 480 QSFISSHLPQ NSSRETTTHL QNSPLDFTFP NSVSPPFEDS RGEIQYRQNM TGAVQSMNQI 540 PSQSWVDNKQ LYSHNSNNTP GNNFSSQVPN NGSMASLSHN MNQSNENFSR RTDMSLIGRS 600 NGGSSTLVQH NEHEKLTPGS RTRSNEEYLL EPTKQDVLGF SQGYDSLDDL MTAMKREQDG 660 GMLAEGTIWS

Sequence ? help Back to Top

Protein Sequence Length: 670 aa Download sequence

MTVEEIRGNM GGGDNFPIGM RVLAVDDNPP CLMLLDSLLR KCQYQVTTTS QARMALKMLR  60
ENKDRFDLVI SDVHMPDMDG FKLLELVGLE MDLPVIMLSG NSDTRLVMKG ISHGACDYLV  120
KPVRIEELRN IWQHVIRRKK VEPKTQSKSN NHVKSNHESG ESGRGQSPTG NADHNGKCNK  180
KRKDEEDEND ENGNDNEDPT TQKRARVVWS IELHRKFVAA VGQLGIEKAV PKRILDLMNV  240
DRLTRENVAS HLQALKYRLY LKRINSVQTQ QANMVAALGG RDFVRMGSLD GLGDFRTLGG  300
SGRYTHAALS SYSSGGMLGR LNSAAGLTIR NLTASQLLQP SHGQNLSNPV NAFTKMEPNI  360
PPASQNASIF QGIPASLELD QLQKTKSTSH IPLDESRLLT SDVLGCSNNS LSNVPNNPML  420
LQGNPLQPPT GGGFGNQHSP NMTPFSSDSF NTGVNGSNFL EHGQNSVQLS KFQSSSFPLT  480
QSFISSHLPQ NSSRETTTHL QNSPLDFTFP NSVSPPFEDS RGEIQYRQNM TGAVQSMNQI  540
PSQSWVDNKQ LYSHNSNNTP GNNFSSQVPN NGSMASLSHN MNQSNENFSR RTDMSLIGRS  600
NGGSSTLVQH NEHEKLTPGS RTRSNEEYLL EPTKQDVLGF SQGYDSLDDL MTAMKREQDG  660
GMLAEGTIWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	1e-117	ARR-B family protein