PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT42072.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 87aa    MW: 9622.65 Da    PI: 9.927
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT42072.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.91.1e-081359346
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                     +WT+   + + +a + + ++   +W+ +a+ +g ++t++++k ++  
       PHT42072.1 13 SWTAKQNKAFERALAVYDKDtpdRWSNVAKAVGGNKTAEDVKRHYEV 59
                     7*******************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    
MSSSQASQGS ASSWTAKQNK AFERALAVYD KDTPDRWSNV AKAVGGNKTA EDVKRHYEVL  60
IHDIMFIESG GVPFPNYKTT RGRTNTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.14e-35MYB_related family protein