PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT42046.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 410aa MW: 46382.5 Da PI: 9.0605

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT42046.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	52.3	1e-16	82	171	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 f+k +++s+v + +l++pkkf+++h +k + t++l de+++++ ++ ++k++ l++GWk+F a++L e+D++vF+l++ +f +v ++r PHT42046.1 82 FIKYMLNSHVARGFWLSFPKKFCDSHL-PK-HDDTVILVDEKNEEFGTNYLVDKNG----LSGGWKGFSIAHNLLEKDVLVFQLIEPCKF--KVYIVR 171 8999********************4.33.3459***********888888....**********************998888..888777 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MAISAMYSKK NSPLSASKKK ALEIKKRALG PRTNKVQNRD KKKGQISNGR KGQKYGSVEA 60 NSLAMLRAKE FQANLPSEFP SFIKYMLNSH VARGFWLSFP KKFCDSHLPK HDDTVILVDE 120 KNEEFGTNYL VDKNGLSGGW KGFSIAHNLL EKDVLVFQLI EPCKFKVYIV RENYLREIDA 180 AAAISPPEFH ADRQEEAMLL PSSEHGLATD QCGNNSDNGC EVLERIRLSK SRVEFKDIKD 240 FSGFHIVVDG LIIDSQVPAH FRAKYYVLCC TQNSYLHDHL LGDPNVKLVA GMITETVSIA 300 DGIKASSIST PSYYFEIWDR SLKAFEYLGL RVGFLRERLS KLINLSCELE NILAPKKLEL 360 AEAKEEMLKL EEKVLKAKHV IKNLDSEVKA LTRKDSKFEL DFKALATTPW

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MAISAMYSKK NSPLSASKKK ALEIKKRALG PRTNKVQNRD KKKGQISNGR KGQKYGSVEA  60
NSLAMLRAKE FQANLPSEFP SFIKYMLNSH VARGFWLSFP KKFCDSHLPK HDDTVILVDE  120
KNEEFGTNYL VDKNGLSGGW KGFSIAHNLL EKDVLVFQLI EPCKFKVYIV RENYLREIDA  180
AAAISPPEFH ADRQEEAMLL PSSEHGLATD QCGNNSDNGC EVLERIRLSK SRVEFKDIKD  240
FSGFHIVVDG LIIDSQVPAH FRAKYYVLCC TQNSYLHDHL LGDPNVKLVA GMITETVSIA  300
DGIKASSIST PSYYFEIWDR SLKAFEYLGL RVGFLRERLS KLINLSCELE NILAPKKLEL  360
AEAKEEMLKL EEKVLKAKHV IKNLDSEVKA LTRKDSKFEL DFKALATTPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42700.1	4e-42	B3 family protein