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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | PHT42045.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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| Family | B3 | ||||||||
| Protein Properties | Length: 337aa MW: 38250.8 Da PI: 9.5829 | ||||||||
| Description | B3 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | B3 | 50.3 | 4.4e-16 | 127 | 216 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
f k ++ps+v +l lpk+f++ h ++ ++t++l de+g++++ + +++ l++GW++F +++L gD ++F+l++ +++v ++r
PHT42045.1 127 FAKCMLPSNVAHGFWLHLPKSFCNMHL--PNHDTTVILVDEWGNEFRTSYLLGRNG----LSAGWRGFSISHRLLKGDLLIFRLIEP--CKMKVYIVR 216
889********************8885..346679***************666666....9**********************9974..335777665 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 337 aa Download sequence |
MEDRNLISVK TVTKKSCKKG QQQQVAVLHT PTSQSSASTS TQTDPSTMIK TVELERKKMI 60 PKKPRSVKSK PKQVKSNNPI KAERIKRKGT GKRTNINDLY DDVEAKYSVM ERAERVLSSL 120 ADEFPSFAKC MLPSNVAHGF WLHLPKSFCN MHLPNHDTTV ILVDEWGNEF RTSYLLGRNG 180 LSAGWRGFSI SHRLLKGDLL IFRLIEPCKM KVYIVRVNGR EVVDAALCLM NWDTLTKSTE 240 FDLVREDKRK RKKAKRLAEP FLVDLSKPKE RVQSDSHSII DLNVSPTEHQ CENNSEDLGS 300 EVLEGSDVTN RLQSNEICCP ETSFLHDNNP HNSVACR |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 247 | 257 | DKRKRKKAKRL |
| 2 | 248 | 256 | KRKRKKAKR |
| 3 | 249 | 253 | RKRKK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G42700.1 | 2e-37 | B3 family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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