PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT42007.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | GATA | ||||||||
Protein Properties | Length: 248aa MW: 27523.8 Da PI: 5.647 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 25.1 | 2.5e-08 | 10 | 37 | 8 | 35 |
GATA 8 kTplWRrgpdgnktLCnaCGlyyrkkgl 35 +T++ R+gp ++ LCnaCGl++r + + PHT42007.1 10 ETSNRRNGPCEKPVLCNACGLRWRTRQT 37 599999***66666**********9865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MLGCKVLIQE TSNRRNGPCE KPVLCNACGL RWRTRQTLDG YIPKHANGEI QRSQLPSEMK 60 PARDDQKLEV EVEVSGQRGS SACLEEEMNN ISSIGSAGSA SDNCIQMEEI NGVSGWDKMS 120 DRNMRLHEMH NEIYALKGSM EVVANSVSKM GDIVDTKVVN ATEIKQLIVA VAAGHGQQQN 180 VPCDGQRNSH REAPIEVDEQ NSGAAKAGTT REGEYQLPTR SYHVEFPKFD GTGLKDWIYK 240 AEHFFDVR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17570.2 | 3e-11 | GATA family protein |