PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT42003.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 278aa    MW: 30773.7 Da    PI: 5.4059
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT42003.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA33.75e-11101128734
        GATA   7 tkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 ++T +WR+gp  ++ LCnaCGl+ r + 
  PHT42003.1 101 IETFNWRNGPHEKPVLCNACGLRRRTRQ 128
                 57********99999********99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MIDRAMNVFE LPKSNGFMLT VLSYNSILDA LIRNSCNVSF ELAQKFYDDM VKSGVSSNVY  60
TYNIMIRGHC GRGNLRKGLV VFDEMEKSGC LRNVVTYNTI IETFNWRNGP HEKPVLCNAC  120
GLRRRTRQTL DGCVPKHANG EIQSSQLSSE MKPARDDQKL EVGVEVSGQH GSSACLEEEM  180
NNISAIGSAG SASDNCIQME ETNAIGVFGR DKMGDHNMRL HEMRKEIDAL KGSMEGVASS  240
VSKMGDIVDT KVANANDRDQ AIDCYNDSGS WAITEWTF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.21e-09GATA family protein