PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT41959.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 286aa    MW: 33060.8 Da    PI: 9.7195
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT41959.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.15.7e-17231041199
                 HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 ++s  l++p  f++++++  e++ + tl+ +sg  W+vkl  r   ++ ++ +GW +F k n+L++g+f+vF++dg  +f  +v++f k
  PHT41959.1  23 FTSE-LRIPAYFLRHISE--ESPEKATLKCLSGGIWNVKL--RYDEDGLLIHNGWDKFQKNNQLEDGEFLVFRYDGGLQF--TVRIFTK 104
                 4554.9*******88864..46778***************..778888**************************986666..9999876 PP
2B363.82.6e-20181274199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 f+k l+  +v+ks+ l++pk+f e+ +++  +++t++l++++ ++W+v++i rk+ ++  + +GW++Fv+ n+Lkeg ++vF+l++    el+v+vf++
  PHT41959.1 181 FVKCLKGYNVNKSCFLYVPKSFYEQLMKSD-NKTTVVLRNSEEKEWKVNCIGRKGYRA--FCGGWRQFVSGNKLKEGYVCVFQLVN--ANELKVSVFDN 274
                 788899999**************9996554.557****************66666655..668********************986..56669*99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MMENPLMKID NRPIFYKIFR PTFTSELRIP AYFLRHISEE SPEKATLKCL SGGIWNVKLR  60
YDEDGLLIHN GWDKFQKNNQ LEDGEFLVFR YDGGLQFTVR IFTKNGLERE VKSTATGKNQ  120
QASVYDIGSK HKRPAEYPFS SKFPEQTRAN GENSTERETP RKRAAVDKAE EGLLTPNIRQ  180
FVKCLKGYNV NKSCFLYVPK SFYEQLMKSD NKTTVVLRNS EEKEWKVNCI GRKGYRAFCG  240
GWRQFVSGNK LKEGYVCVFQ LVNANELKVS VFDNPSESLL KLAAER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.15e-24B3 family protein