PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT41865.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 335aa MW: 37421.7 Da PI: 6.4128

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT41865.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.6	6.1e-10	60	108	2	54
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ + rE+ RRdr+N+ f eL + l ++ +K++Ka+iL +v+ +k+L PHT41865.1 60 KVLKADREKLRRDRLNEQFMELGKTLDPD----RPKNDKASILSDTVQMLKDL 108 566789******************997....79**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MDQLNHGVGL YQSNQLPNHC LTELNQLPSD VSMPSNGLLS ESSSKQKPEA ELKDSIAARK 60 VLKADREKLR RDRLNEQFME LGKTLDPDRP KNDKASILSD TVQMLKDLTA QVSRLKSEYA 120 ALTDESRELT QEKNDLREEK TSLKSDIESL NAQYQQRMRS MYPWAGMDHS LVMHPPSYSY 180 PMPVPVPTGP VPMHPSLQPY PFFSNHNPAV VPNPSSYVQY MTSNTLIEQQ PTQYMSPVIQ 240 PGSVIRQESR NKLSDQGESR TEKNEDSNEV ATDLELKTPG STSEQDLSSG QKKPRKLPKK 300 DNSLTDGNSS SRCSSSHSVQ AVSSNSVVRG TKSDD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	292	300	KKPRKLPKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19860.1	1e-80	bHLH family protein