PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT41829.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

FAR1

Protein Properties

Length: 771aa MW: 88595.4 Da PI: 7.0018

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT41829.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	100	2.4e-31	64	155	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGFs+r+s+s++s+++g i++r fvC keg+r+ ++k+ +++ +r+r+ tr+gCka l vk +++gkw v+++++eHnHel+p PHT41829.1 64 FYNSYARRVGFSTRVSSSRRSRKDGAIIQRSFVCAKEGFRNLNEKRtkDREIKRPRTITRVGCKAALSVKIQDSGKWLVSNFVKEHNHELVP 155 9*************************************998888545677889*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 771 aa Download sequence
MNFGGGGSED GDVDGDDVLD EENVSHGNFA AVPSYSYSPP QGDLLDLEPY EGMLFESEEA 60 AKAFYNSYAR RVGFSTRVSS SRRSRKDGAI IQRSFVCAKE GFRNLNEKRT KDREIKRPRT 120 ITRVGCKAAL SVKIQDSGKW LVSNFVKEHN HELVPPDQVH CLRSHRQISG PAKTLIDTLQ 180 AAGMGPRRIM SALIKEYGGI SKVGFTEVDC RNYMRNNRQR SLEGDIQLLL DYLKHMNIQN 240 PGFFYAVQGD EDQCTGNVFW ADSKARTNYI YFGDTVTFDT TYRSNRYRLP FAPFTGVNHH 300 GQPVLFGCAF LINESEASFI WLFKTWLAAM SGQPPLSMTT DHDAVIRSAI MQVFPETRHR 360 FCKWHIFKKC QEKLSHVYLE HPNFEADFHK CVNLTESTEE FETCWLSLVD KYGLRDHDWL 420 QLIYLDRRQW VQVYLRDTFF AEMSITQRSD SMNSYFDGYV NASTNLNQFF KLYEKAVESR 480 TEKEVKADYD TMNAFPVLKT PSPMEKQASE VYTKKLFMRF QEELVATLTF TANIVEDDGL 540 VTTYQVAKFG DDHRAYYVRF NVLEMKATCS CQMFEFSGLL CRHVLAVFRV TNVLTLPSHY 600 ILKRWSRSAK SNVALEDRVA DIINCYLESH TVRYNMLRHE AFKFVEKGAE TVDSYAVAMT 660 ALEEASKKVS LVVKHDGRIS LVNGHCRENL IRNGVRANYN IEDEQRSLAC PLAEDDMDTK 720 IQELSYQLDC ANRKCEVYRA NLYSVLKDID DHKQQLSIKV QSIKLSLKDG I

Sequence ? help Back to Top

Protein Sequence Length: 771 aa Download sequence

MNFGGGGSED GDVDGDDVLD EENVSHGNFA AVPSYSYSPP QGDLLDLEPY EGMLFESEEA  60
AKAFYNSYAR RVGFSTRVSS SRRSRKDGAI IQRSFVCAKE GFRNLNEKRT KDREIKRPRT  120
ITRVGCKAAL SVKIQDSGKW LVSNFVKEHN HELVPPDQVH CLRSHRQISG PAKTLIDTLQ  180
AAGMGPRRIM SALIKEYGGI SKVGFTEVDC RNYMRNNRQR SLEGDIQLLL DYLKHMNIQN  240
PGFFYAVQGD EDQCTGNVFW ADSKARTNYI YFGDTVTFDT TYRSNRYRLP FAPFTGVNHH  300
GQPVLFGCAF LINESEASFI WLFKTWLAAM SGQPPLSMTT DHDAVIRSAI MQVFPETRHR  360
FCKWHIFKKC QEKLSHVYLE HPNFEADFHK CVNLTESTEE FETCWLSLVD KYGLRDHDWL  420
QLIYLDRRQW VQVYLRDTFF AEMSITQRSD SMNSYFDGYV NASTNLNQFF KLYEKAVESR  480
TEKEVKADYD TMNAFPVLKT PSPMEKQASE VYTKKLFMRF QEELVATLTF TANIVEDDGL  540
VTTYQVAKFG DDHRAYYVRF NVLEMKATCS CQMFEFSGLL CRHVLAVFRV TNVLTLPSHY  600
ILKRWSRSAK SNVALEDRVA DIINCYLESH TVRYNMLRHE AFKFVEKGAE TVDSYAVAMT  660
ALEEASKKVS LVVKHDGRIS LVNGHCRENL IRNGVRANYN IEDEQRSLAC PLAEDDMDTK  720
IQELSYQLDC ANRKCEVYRA NLYSVLKDID DHKQQLSIKV QSIKLSLKDG I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein