PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT41802.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 320aa    MW: 35312.7 Da    PI: 6.4019
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT41802.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.41.2e-13103146855
                 HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  Er RR+++++ fe+L++llP++    + K +K++i+ +Av+YIk Lq
  PHT41802.1 103 TERERRKKMRNMFENLQTLLPHL----QSKADKSSIVDEAVRYIKILQ 146
                 6*********************9....79****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MNEGGENDCL IWENNEVWSF LNSGNGQLVG SERIQVGDKL SDPNRSDTCQ PLTVVKEVGE  60
ASLGSKKRCT SNEKKGDNES GEPKSDAGED GGRESGYEIH IWTERERRKK MRNMFENLQT  120
LLPHLQSKAD KSSIVDEAVR YIKILQTTVN NLKEQKLQRI QSGMARLSTL STPIMTPQKL  180
SSWEQFLADK GSASNSAAIT PKNNNNNVTG IPLLNTNVPT DFVTWSSQNV VLNVCGEEAH  240
ISVCCPKTSG LFTFICHVLE KNKIDIVSAH VSSDQFRSLF MIQTHARGAS GLEQLISGAL  300
SVEDMYKQAA HELMSGINPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.12e-45bHLH family protein