PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT41800.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 322aa    MW: 35754.7 Da    PI: 7.4514
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT41800.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.42.2e-12103144853
                 HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
         HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 
                  Er RR+r+++ feeL++llP++    ++K++ ++i+ ++v+YIk+
  PHT41800.1 103 KERERRKRMRNMFEELQTLLPHL----QPKPDQSSIVDETVRYIKM 144
                 6*********************9....79***************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MNEGGENDCL IWENDEVWSF LNSDNGQLVG SGVEFVGDKL PDLNRSNTCQ ALTAVKEVGK  60
ASLGGKKRCR SNVKKGTNES CEPKSGANGD GGRESGHELR IRKERERRKR MRNMFEELQT  120
LLPHLQPKPD QSSIVDETVR YIKMVENTVD NLKEQKLVRI QLGIARLSTM NNPVMTPQKL  180
RVGTSWEQFL ADKGSACNSA AITPKNNNNV TGIPLLNTNV PTDFETWSSD NVVLNVCGEE  240
AHISVCCPKK PGLFTFICHV LEKNKIDIVH AHVLSDQFRN LFMIQTHARG ASGLEQLISG  300
ALSVEDMYKQ AAHEIMLGIN PK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.15e-28bHLH family protein