PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT41794.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 322aa MW: 35670.2 Da PI: 6.6007

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT41794.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.1	6.8e-13	100	146	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h Er RR+r+++ feeL++ll ++ ++K +K++i+ ++v+YIk+L+ PHT41794.1 100 HIRKERERRKRMRNMFEELQTLLLHL----QPKADKSSIVDETVRYIKMLE 146 7889*******************9....79**************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MNEGGENDCL IWENDEVWSF LNSDNGQLVG SGVEFVGDKL PDPNRSNTCQ APTTVKEVGK 60 ASLGGKKKCR SNEKKGTNES GEPKSGANGD GGRESGHELH IRKERERRKR MRNMFEELQT 120 LLLHLQPKAD KSSIVDETVR YIKMLENTVD NLKEQKLERI QLGIARLSTM NNPIMTPQKL 180 RVGTSWEQFL ADKGSASNSA AITPKNNNNV TGIPLLNTNV PTDFETWSSD NVVLNVCGEE 240 AHISVCCPKK PGLFTFICHV LEENKIDIVH AHVSSDQFRN LFMIQTHARG ASGLEQLISG 300 ALSVEDMYKQ AAHEIMSGIN PK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49770.1	1e-33	bHLH family protein