PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT41693.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 352aa    MW: 39789.9 Da    PI: 6.5732
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT41693.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH407.1e-13172219355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 + h ++Er+RR+++ ++f  L  l+P +     kK++Ka++L  A++Y+k+Lq
  PHT41693.1 172 QDHIIAERKRREKLSQRFIALSALIPGL-----KKMDKASVLGDAIKYLKQLQ 219
                 6799************************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MEYYGFNQQW PISSFDELSA ISIAASFGEN TLHDSFIYHD QPILGHKRPI ELSQTVEERP  60
LKNPKTSHSW NNNNNSYHEN DQMLSSQSVA SPNYSHLINS NNLSNQQDVT MKPKEETTLS  120
SSSITFAADH HNNMVCHQDS FANQNYMFKA NNSCQGANKS VSTNNGKLTQ AQDHIIAERK  180
RREKLSQRFI ALSALIPGLK KMDKASVLGD AIKYLKQLQE RVKTLEEQTK KKSVESVVFM  240
KKYELYGDGE NSSSDENNSI GTQQMDEALP EIEARICEKD VLIRIHCEKR KGIVEKAVTE  300
IEKLHLSIIN TCALTFGTCA LDITIIAQMD EEFAMTVKDL VKNLHTALKM VI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1178183ERKRRE
2179184RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.18e-61bHLH family protein