PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT41301.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | C2H2 | ||||||||
Protein Properties | Length: 403aa MW: 44468.8 Da PI: 9.1339 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.8 | 1.9e-05 | 71 | 93 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H PHT41301.1 71 FICEVCNKGFQREQNLQLHRRGH 93 89*******************88 PP | |||||||
2 | zf-C2H2 | 12.5 | 0.00045 | 148 | 170 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ PHT41301.1 148 WKCDKCSKKYAVQSDWKAHSKTC 170 58*****************9998 PP | |||||||
3 | zf-C2H2 | 10.8 | 0.0016 | 178 | 196 | 5 | 23 |
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg+ Fsr++++++H + PHT41301.1 178 DCGTIFSRRDSFVTHRAFC 196 8**************8765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 403 aa Download sequence |
MSNLSYGNSS TEEADEIPNV LSSTTSDGSS VHQEQPLPSP NKRRRKLPGN PDPSAEVIAL 60 SPKTLMATNR FICEVCNKGF QREQNLQLHR RGHNLPWKLK QKTSNHEIKK RVYICPESSC 120 VHHDPARALG DLTGIKKHFS RKHGEKKWKC DKCSKKYAVQ SDWKAHSKTC GTKEYKCDCG 180 TIFSRRDSFV THRAFCDALA EENNKVNQVL ASTTQPAATS TGSTQLGPEL ISNTSMLNLL 240 QISNPNIKVP PTSLSNMAGS MFSSSSGYSQ LGTNSSNMSS ATALLQQAAQ MGATVSSNMN 300 SSINVARKSY RSPFNGMQIP IISDHDQIQP QIGNTSVHGF AGSMLQNSSN NDSLTLDFLG 360 IGGMRQRNLH EIIQQQQQQE MSFEQQKQVG QQSIQGMNSM WDD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50700.1 | 1e-100 | C2H2 family protein |