PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT41151.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 338aa    MW: 38455.8 Da    PI: 4.6977
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT41151.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH46.18.6e-15137188155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +r +h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i+  A++Y+k+L+
  PHT41151.1 137 QRITHIAVERNRRKQMNEYLSVLRTLMPQS---YVQRGDQASIVSAAINYVKELE 188
                 799***************************...9******************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MALEAITQQQ QQYLCALLGS TNWSIGSDSG SGSGSALDYY NNEGFDEFLT NNQNVSAPQE  60
YDDYSNWNLP PPLLVDSQNE FHEWDQTFSV LDHNFTIPDQ QEQLPALGTP VENCSSTTRT  120
RRRRTRTKKN EEEIENQRIT HIAVERNRRK QMNEYLSVLR TLMPQSYVQR GDQASIVSAA  180
INYVKELEQQ LQFLSGQKHL TGQNEEANGE TSPFSEFFSI PQYSTTMTVA TTSENGPCMN  240
ENYMNQQLPA TADIEVTMVE NHANLKIRSK RRPRLLPRII SGLESLRLSV LHLNVSKVDQ  300
FVLCSLSLKV EEDCQMSSVE EIAAVVNQIL RRIHEEAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.13e-73bHLH family protein