PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT40710.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

CPP

Protein Properties

Length: 971aa MW: 104996 Da PI: 6.3966

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT40710.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	48.2	2.1e-15	550	588	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+CnCkk+kClk+YC+Cfaag++C +C+C++C+N+ e PHT40710.1 550 CKRCNCKKTKCLKLYCDCFAAGVYCVGSCTCQGCFNRPE 588 79**********************************876 PP
2	TCR	50.2	5.1e-16	637	675	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks ClkkYCeC++a++ Cs+ C+Ce+CkN PHT40710.1 637 RHKRGCNCKKSMCLKKYCECYQANVGCSSGCRCEGCKNV 675 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 971 aa Download sequence
MDSPEPSSKS CTAPISSSEP VPAQDSPVFN YISNLSPIQP VKSAPIVQYF PGLNSPPLLF 60 TSPRINAQSQ SSLLKRSQFP QLSSEAFCGK NEDYNNVVTD SDGTRVSVSP PRSGLNPFVQ 120 KISDNSIFVH EQSGSPIRCV DEFLVDVSNS ESGNPSNSTN TSLKVAESIP QSPNSAGDLK 180 ESVANIASKD ARQDEIPEVA ARVVVEQAEQ DNKGNSSYNQ KDIGACSSNT DPDLPPTSLC 240 TEIVPYLPAH SSSHYHYGDR HMAQFSRVDC SMLDEASNIP IESLETARDC SNDSDTISTM 300 SVAPDESIVQ HDSQTKAGQH QSGISRRCLQ FEDAQQKIAP ASSGSQSASG IVSCSVAPVS 360 PAVLEVVEQG LSNRSSTAND RPLTQLASSS VDSEKLTVKV PKPSGIGLHL NSIVNGMEAG 420 SGATVSVKST ERGNLSICGK KLTSMVSCHP SKNMKNCLIS SNVVGSNLTS GDNDGRHESY 480 VPNTESVSAS FLLNNAKPLN DTVLLKPTEH TPSHKRKFNS EHIDSPMDYN LSSPQKKRQK 540 TSDGNVGDGC KRCNCKKTKC LKLYCDCFAA GVYCVGSCTC QGCFNRPEYE DTVLDVRQQI 600 QCRNPLAFAP KVVQHSTDSP TNVVAEDGSS FTPSSARHKR GCNCKKSMCL KKYCECYQAN 660 VGCSSGCRCE GCKNVYGRKE EYGKDLVNRH CITERLERSV EEEVEMVTAT SGLLQSDPRN 720 QCNLTPLTPS FQCSNRGKNA SKTWFTSGRY VSSPESGQAN TAAYGLSPGS PRSSKNHDID 780 QETTDDILDI VPFDQENHGN AKLANEISPG FHVTDNTDDL LALPNSQDWA SNSDNQLIPQ 840 TVHFQSTPLL CWRNSPMTPM TQFDRSGMNV LELLDSNKKP YVMEDDTPEI LKESSIPQNG 900 VKVNSPNKKR ISPPHRHLNE LGATSSGGGL KTGRKFILRA VPSFPPLTPC IESKDVAAHS 960 TNNSQKDSSS K

Sequence ? help Back to Top

Protein Sequence Length: 971 aa Download sequence

MDSPEPSSKS CTAPISSSEP VPAQDSPVFN YISNLSPIQP VKSAPIVQYF PGLNSPPLLF  60
TSPRINAQSQ SSLLKRSQFP QLSSEAFCGK NEDYNNVVTD SDGTRVSVSP PRSGLNPFVQ  120
KISDNSIFVH EQSGSPIRCV DEFLVDVSNS ESGNPSNSTN TSLKVAESIP QSPNSAGDLK  180
ESVANIASKD ARQDEIPEVA ARVVVEQAEQ DNKGNSSYNQ KDIGACSSNT DPDLPPTSLC  240
TEIVPYLPAH SSSHYHYGDR HMAQFSRVDC SMLDEASNIP IESLETARDC SNDSDTISTM  300
SVAPDESIVQ HDSQTKAGQH QSGISRRCLQ FEDAQQKIAP ASSGSQSASG IVSCSVAPVS  360
PAVLEVVEQG LSNRSSTAND RPLTQLASSS VDSEKLTVKV PKPSGIGLHL NSIVNGMEAG  420
SGATVSVKST ERGNLSICGK KLTSMVSCHP SKNMKNCLIS SNVVGSNLTS GDNDGRHESY  480
VPNTESVSAS FLLNNAKPLN DTVLLKPTEH TPSHKRKFNS EHIDSPMDYN LSSPQKKRQK  540
TSDGNVGDGC KRCNCKKTKC LKLYCDCFAA GVYCVGSCTC QGCFNRPEYE DTVLDVRQQI  600
QCRNPLAFAP KVVQHSTDSP TNVVAEDGSS FTPSSARHKR GCNCKKSMCL KKYCECYQAN  660
VGCSSGCRCE GCKNVYGRKE EYGKDLVNRH CITERLERSV EEEVEMVTAT SGLLQSDPRN  720
QCNLTPLTPS FQCSNRGKNA SKTWFTSGRY VSSPESGQAN TAAYGLSPGS PRSSKNHDID  780
QETTDDILDI VPFDQENHGN AKLANEISPG FHVTDNTDDL LALPNSQDWA SNSDNQLIPQ  840
TVHFQSTPLL CWRNSPMTPM TQFDRSGMNV LELLDSNKKP YVMEDDTPEI LKESSIPQNG  900
VKVNSPNKKR ISPPHRHLNE LGATSSGGGL KTGRKFILRA VPSFPPLTPC IESKDVAAHS  960
TNNSQKDSSS K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	4e-62	CPP family protein