PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT40667.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family HB-other
Protein Properties Length: 410aa    MW: 46591.8 Da    PI: 7.9655
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT40667.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox46.56.1e-15191247355
                 --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHH CS
    Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRake 55 
                 k  ++t+eq+e+Le+l++++ +ps  +r++L + +    + + +q+kvWFqNrR k+
  PHT40667.1 191 KYVRYTTEQVEALERLYHECLKPSSLRRQQLIRDCpipsNSKPKQIKVWFQNRREKQ 247
                 5678*******************************99999999***********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    
MTLKKLVLSE CDRIIDRGVL SLMQFCCLEE LDLAECGPAV TEVAGEAIAS NKSLKKLNLS  60
WLVNVSDATI VAIAESCKNL DALNLAGCEF VIGEGVRTLT KHRSLKELIL TSCEKLSGYD  120
LEELVLGCQT LEYIVVDRRV YVRPKCPLAY LVELLLCVHQ AMSPVFDDLN GHLMMEMTSS  180
CKDKLGMDSG KYVRYTTEQV EALERLYHEC LKPSSLRRQQ LIRDCPIPSN SKPKQIKVWF  240
QNRREKQLKE SLRLQAVNRK LTAMTKLLME ENDRLQKQVS QLVYENSFSR QQSQSVLTIL  300
FILLSLLNSF SLLVTLIIIQ LVLVLYMCYS GNMEEYSVTT KEQNLVTEVF IAKLDRSLYA  360
PCGRTKGHLY SDCIAAILMP SIYWYYASIL AVKATKVCVI TYMVYVLKTH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.32e-54HD-ZIP family protein