PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT40522.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HSF

Protein Properties

Length: 363aa MW: 41325.4 Da PI: 4.4917

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT40522.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.1	9.2e-36	32	123	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+ye++ed++++e+isws++ nsf+v+d+++f++++Lp++Fkhsnf+SF+RQLn+YgF+kv+ ++ weF+++ F g+k+ll++ik PHT40522.1 32 FLSKTYEMVEDSSTDEVISWSRERNSFIVWDSHKFSTTLLPRFFKHSNFSSFIRQLNTYGFRKVDPDR---------WEFANEGFLGGQKHLLKTIK 119 9**************************************************************999.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+++ PHT40522.1 120 RRRN 123 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MDDGVKVKVE EEGIATAVLP MEGLHDVGPP PFLSKTYEMV EDSSTDEVIS WSRERNSFIV 60 WDSHKFSTTL LPRFFKHSNF SSFIRQLNTY GFRKVDPDRW EFANEGFLGG QKHLLKTIKR 120 RRNVGQSMSQ QGSGPCIEVG YYGMEEELER LKRDKNVLIT EIVKLRQQQQ SARNQIIAMG 180 EKIESTEKKQ EQMINFLAKI FSNPTFLQQY LDKHVQRKDK QRIQVGQKRR LTMTPSIENL 240 QDVASVATAS DQPMNYSNQE REAELTNIGT DIEMLFSAAL ENESSSNVRS ASVVTASGTD 300 MEPVPENIWE ELLGDDHISG DGAEEVPIVD QPEFVVEVED LVSKTPVVWG EELEDLVDQL 360 DFL

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MDDGVKVKVE EEGIATAVLP MEGLHDVGPP PFLSKTYEMV EDSSTDEVIS WSRERNSFIV  60
WDSHKFSTTL LPRFFKHSNF SSFIRQLNTY GFRKVDPDRW EFANEGFLGG QKHLLKTIKR  120
RRNVGQSMSQ QGSGPCIEVG YYGMEEELER LKRDKNVLIT EIVKLRQQQQ SARNQIIAMG  180
EKIESTEKKQ EQMINFLAKI FSNPTFLQQY LDKHVQRKDK QRIQVGQKRR LTMTPSIENL  240
QDVASVATAS DQPMNYSNQE REAELTNIGT DIEMLFSAAL ENESSSNVRS ASVVTASGTD  300
MEPVPENIWE ELLGDDHISG DGAEEVPIVD QPEFVVEVED LVSKTPVVWG EELEDLVDQL  360
DFL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	115	121	LKTIKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-118	HSF family protein