PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT40197.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Nin-like

Protein Properties

Length: 964aa MW: 107248 Da PI: 6.4508

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT40197.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	90	1.9e-28	567	618	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l+++Fs+++kdAAk++gvc+T+LKriCRqyGI+RWP+Rki+++ PHT40197.1 567 AEKHVSLSVLQQHFSGSLKDAAKSIGVCPTTLKRICRQYGISRWPSRKISKV 618 5899*********************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 964 aa Download sequence
MENGIGFRAS PRSHQMEGIA SIDGGTCCSY IDDTFNSAME IMNLDTCASW CSSSPHGIQQ 60 MFASYPAFSP INPMSINYEP FEELNYYEQN TETFPCGREN FMFPQNHLVD KKQNYVTDRV 120 QNCIIPKSPC QSLAERMLKA LELFKKSSGG GILAQVWIPM KSGDQYILST YEQPFLLDQV 180 LSGYREVSRK FTFDLEMKPG SCPGLPGRVF TSRIPEWTSN ILYYKEAEYL RVQYAVDHEV 240 RGCIALPVLE EDGHDTPCCA VLELVTMKEM PNFDLEMSHV CQALQAVNLR STTPPRFSSK 300 SISKNQRAAL TEIKDVLRAV CHAHRLPLAL TWIPRSCREG GNDIIRAHAR GSIARSDEKR 360 VLHVENIACY VKDKEMQGFL HACMGHDLEE GQGIVGKSLQ SNHPFFYLDV KEYHISEYPL 420 VHHARKFGLN AAVAIRLRST LTGDDDYVVE FFLPVDIEGS TEQQLLLDNL SRTMQRICRS 480 LRTLSDAELV GQEGEKCGLQ SESGLSLPPI DFSRRISQQS LLDNTLDLSK APIDVCDLER 540 AGIEANRSHK QTPNVSKRQT GKKRSAAEKH VSLSVLQQHF SGSLKDAAKS IGVCPTTLKR 600 ICRQYGISRW PSRKISKVNR SLVKIQTVLK SVQGIEGGLK FDTVTGGLVA ASSILQDFDS 660 RKSVVFPCKD VLIQNPEFHL QDAVSMLQTS CIDSHNSLVK IEENLHVDGS QLAESNHVSP 720 SSFRVDDKPN SSVSGVCHGS NLAALVEGSS LPSKPEWTSP RNVSLASFHT KEGWRSSGLY 780 KGSLNLDTSG CHFISRCPDS MANTKTEGST EKDGDDGIME HNKVCTLGMT DSSNTSDSMI 840 NGSSFSSRSS SERKHTTVEH GGSQITVKAT YKEDKIRFKF EPSSGCFQLY EEVAKRFKLQ 900 TGTFQLQYLD DEEEWVMLVN DADLNECSEI LDILGTRNVK LLIHDVSCTV GSSGSSNCFL 960 TNDF

Sequence ? help Back to Top

Protein Sequence Length: 964 aa Download sequence

MENGIGFRAS PRSHQMEGIA SIDGGTCCSY IDDTFNSAME IMNLDTCASW CSSSPHGIQQ  60
MFASYPAFSP INPMSINYEP FEELNYYEQN TETFPCGREN FMFPQNHLVD KKQNYVTDRV  120
QNCIIPKSPC QSLAERMLKA LELFKKSSGG GILAQVWIPM KSGDQYILST YEQPFLLDQV  180
LSGYREVSRK FTFDLEMKPG SCPGLPGRVF TSRIPEWTSN ILYYKEAEYL RVQYAVDHEV  240
RGCIALPVLE EDGHDTPCCA VLELVTMKEM PNFDLEMSHV CQALQAVNLR STTPPRFSSK  300
SISKNQRAAL TEIKDVLRAV CHAHRLPLAL TWIPRSCREG GNDIIRAHAR GSIARSDEKR  360
VLHVENIACY VKDKEMQGFL HACMGHDLEE GQGIVGKSLQ SNHPFFYLDV KEYHISEYPL  420
VHHARKFGLN AAVAIRLRST LTGDDDYVVE FFLPVDIEGS TEQQLLLDNL SRTMQRICRS  480
LRTLSDAELV GQEGEKCGLQ SESGLSLPPI DFSRRISQQS LLDNTLDLSK APIDVCDLER  540
AGIEANRSHK QTPNVSKRQT GKKRSAAEKH VSLSVLQQHF SGSLKDAAKS IGVCPTTLKR  600
ICRQYGISRW PSRKISKVNR SLVKIQTVLK SVQGIEGGLK FDTVTGGLVA ASSILQDFDS  660
RKSVVFPCKD VLIQNPEFHL QDAVSMLQTS CIDSHNSLVK IEENLHVDGS QLAESNHVSP  720
SSFRVDDKPN SSVSGVCHGS NLAALVEGSS LPSKPEWTSP RNVSLASFHT KEGWRSSGLY  780
KGSLNLDTSG CHFISRCPDS MANTKTEGST EKDGDDGIME HNKVCTLGMT DSSNTSDSMI  840
NGSSFSSRSS SERKHTTVEH GGSQITVKAT YKEDKIRFKF EPSSGCFQLY EEVAKRFKLQ  900
TGTFQLQYLD DEEEWVMLVN DADLNECSEI LDILGTRNVK LLIHDVSCTV GSSGSSNCFL  960
TNDF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43500.1	0.0	Nin-like family protein