PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT40187.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GRAS
Protein Properties Length: 455aa    MW: 52416.4 Da    PI: 6.0957
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT40187.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS314.52.4e-96714453374
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                 +lL ecA+a+ ++d +++++lL+ l+elasp+gd +q+la+yf++AL  + ++++ ++yk+l++ ++++k+ +++ +    f+evsP+ +f+h++ N a
  PHT40187.1  71 RLLRECATAIYNKDSTKIHHLLWMLNELASPYGDCNQKLAFYFLQALFCKATDTGLRCYKTLTSASEKSKSFDSSRKLILKFQEVSPWTTFGHVASNGA 169
                 6899**********************************************************8888886665555555556****************** PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl.vakrledleleeLrvkpg 199
                 +lea++ge+++HiiD++ + ++QWp+Ll+aLa+R++++p+l++T+v+      k  ++e+++r++kfA+ +gvpfefnv+   ++l++l+ e+L+++++
  PHT40187.1 170 LLEALDGENKLHIIDISDTFCTQWPTLLEALATRNDETPHLKLTVVVTDCILVKSVMKEVAQRMEKFARLMGVPFEFNVIsELNHLKELTKESLNIQEE 268
                 ************************************************7766***************************96667*************** PP

        GRAS 200 EalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 EalaVn++ +l ++      +e+ r +v+++++sl+Pkvv++ve+ead   ++++F++ f e+l++y+  f++l++++p++s+er ++Ere  ++ iv+
  PHT40187.1 269 EALAVNCIGALRKVE-----IEE-RGAVIRMLQSLNPKVVTIVEHEADFssTRNDFVKCFEECLRFYTLYFEMLDESFPTTSNERLVIERE-SSKCIVK 360
                 ************997.....666.99********************999545669************************************.99***** PP

        GRAS 297 vvacegae....rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdg...yrveeesgslvlgWkdrpLvsvSaWr 374
                 v+ac ++       er+e+ ++W+erl+e+ F+p pl+++a++++k+ll+++k ++     +v++es  ++l+W+++++v++S+W+
  PHT40187.1 361 VLACDNEIsnqgDSERKERGNQWSERLREC-FTPSPLNDDAVDDVKALLKRYKaGWSlvqQQVDQESPGIYLTWREEQVVWASSWK 445
                 ****87541122579*************99.**********************444333345558899*****************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 455 aa     Download sequence    
MEKSLFFTKP TNYSYFLEKK DVQYHHFHGH HHIHLINMQN PNQQPHHENS SSRSQSPEYG  60
EPISDAKWAP RLLRECATAI YNKDSTKIHH LLWMLNELAS PYGDCNQKLA FYFLQALFCK  120
ATDTGLRCYK TLTSASEKSK SFDSSRKLIL KFQEVSPWTT FGHVASNGAL LEALDGENKL  180
HIIDISDTFC TQWPTLLEAL ATRNDETPHL KLTVVVTDCI LVKSVMKEVA QRMEKFARLM  240
GVPFEFNVIS ELNHLKELTK ESLNIQEEEA LAVNCIGALR KVEIEERGAV IRMLQSLNPK  300
VVTIVEHEAD FSSTRNDFVK CFEECLRFYT LYFEMLDESF PTTSNERLVI ERESSKCIVK  360
VLACDNEISN QGDSERKERG NQWSERLREC FTPSPLNDDA VDDVKALLKR YKAGWSLVQQ  420
QVDQESPGIY LTWREEQVVW ASSWKPQEKS MEGAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.11e-134GRAS family protein