PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT40056.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 389aa    MW: 45179.3 Da    PI: 9.9241
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT40056.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.83.3e-121595899
                -HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  8 sdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                   +k+g l +p  f+ ++ +g+   +++ ++  + g+   vk++ +       +++GW  Fv++++L+ gD++vF+++g++ef   v++f++
  PHT40056.1 15 QPGFKNG-LKIPIGFL-KYlKGQ--DQIEHVVLRSGGKNSLVKVKCW------RFGAGWAAFVEQHDLQLGDILVFRHEGNMEF--EVSIFDS 95
                4455665.********.554666..4567788888999999999223......3789**********************99999..9999986 PP
2B3474.5e-151662421190
                 HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
          B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                 ++++ l lp  fa ++g+ ++ +  l+++de+ rsW++kl  + +  r+++++GW +Fv +n Lk gD + F+++ ++e+
  PHT40056.1 166 NSRCFLFLPQCFAYANGLTNK-KCGLIIKDERQRSWNLKL--SSYEARTYIRAGWPKFVVDNCLKKGDRIRFEVVTNEET 242
                 567999*******99977644.347999************..99999**************************8875443 PP
3B3452e-14284364387
                 EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
          B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                 + +++++ ++++ l lp +fa+++g+ + ++ +++l+ e  r W+v l   ++++++ +  GW +F  +ngL++gD+  F+l+++
  PHT40056.1 284 S-TLKPYCFTKAFLFLPMRFAKSNGLMN-RNCEMILKGEVQRCWSVWL--GRSGNHFGIIHGWTKFRAENGLQVGDVYKFELIKN 364
                 4.4489999***************8775.5569***************..*******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    
MTIPPKKPHF FKPIQPGFKN GLKIPIGFLK YLKGQDQIEH VVLRSGGKNS LVKVKCWRFG  60
AGWAAFVEQH DLQLGDILVF RHEGNMEFEV SIFDSTHCDR EYAEYLQEED ACNNVEETSK  120
KFKFNGRPRP RVKLSKKASS HVKVVVHHKS FGHSHFDHII REYNINSRCF LFLPQCFAYA  180
NGLTNKKCGL IIKDERQRSW NLKLSSYEAR TYIRAGWPKF VVDNCLKKGD RIRFEVVTNE  240
ETPIWKFQVS NQETPLQKFQ GEFSRLSSLL FLCLLDVGHS CFVSTLKPYC FTKAFLFLPM  300
RFAKSNGLMN RNCEMILKGE VQRCWSVWLG RSGNHFGIIH GWTKFRAENG LQVGDVYKFE  360
LIKNGEIPIA HFHCKYSVKV AKTEEHRSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.18e-42B3 family protein