PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT40023.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB_related | ||||||||
Protein Properties | Length: 102aa MW: 11565.4 Da PI: 10.0544 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28.5 | 3.7e-09 | 12 | 56 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+ E+ l + + +++G+ Wk+I + ++ gRt+k + +w + PHT40023.1 12 KGSLTPNEQNLVISLQAKYGNT-WKKIVAQVP-GRTAKRLGKWWEVF 56 67789***************99.*********.*****999999776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 102 aa Download sequence |
MSAISKKLLI KKGSLTPNEQ NLVISLQAKY GNTWKKIVAQ VPGRTAKRLG KWWEVFKEKQ 60 LKQHQDYVES PEIFAIFGGG GSPEGVVSDK YDHILEIFAE KY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37630.1 | 2e-23 | MYB family protein |