PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT39995.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 512aa    MW: 59185.6 Da    PI: 7.6568
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT39995.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3444.1e-141695998
                HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3  9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                  +k+g l +p  f+++ +g   e+    +  ++g++  vkl  ++++    l++GW++F+++++L+ gD +vF++dg++ef   v++f+
  PHT39995.1 16 PGFKHG-LKIPVGFLKHLEGRG-EKEHAAVLKRDGKKCLVKL--NGQK----LEEGWEQFAEEHDLQLGDLLVFRHDGNMEF--DVSIFN 95
                556666.********6665443.3346889999*********..8888....*************************99999..888875 PP
2B351.71.6e-16142225592
                 -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 +++ ++l++g l++p+kfa+++g+++ ++  l+++de+ rsW++++    + +++++++ W eF  an++k+gD ++F+++++ ++++
  PHT39995.1 142 TIKQYSLRNGYLRIPNKFAKANGLIN-KDCGLIIRDERQRSWNLRI--YTSCSQVYMGGRWGEFRAANDIKAGDQIMFEVVSN-GEQP 225
                 568999****************7774.4557***************..88888999***********************8875.3334 PP
3B353.35.1e-17269353593
                 -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
          B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                 +++ ++l++g l++p kfa+e+g+ ++ +  l+++de+ rsW++++    +  ++ +++ W++F+ an++k+gD ++F+++  s+ ++v
  PHT39995.1 269 TVKRYYLTNGYLRIPSKFAKENGLTNK-ECGLIIRDERQRSWNLRM--YTSCHHVCIGGRWRKFCVANDIKVGDQIMFEVVT-SGVQPV 353
                 567899****************76643.346999************..9999999************************765.555555 PP
4B338.91.6e-12409490590
                 -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
          B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                 +++++ l+ g l+lpk+ a ++g+++++  +l+++de  rsW++ l  r  + ++ +++GW eF +a  LkegD ++F+++ + ++
  PHT39995.1 409 TIKPYCLTYGYLCLPKEIALRNGLISKK-CDLIIRDECQRSWNLIL--RPFGTSVCIRGGWDEFRDAYCLKEGDHIMFEVVTD-GE 490
                 578999999*************999755.59***************..*******************************8764.33 PP
Sequence ? help Back to Top
Protein Sequence    Length: 512 aa     Download sequence    
MKVPPVKPHF FKPVLPGFKH GLKIPVGFLK HLEGRGEKEH AAVLKRDGKK CLVKLNGQKL  60
EEGWEQFAEE HDLQLGDLLV FRHDGNMEFD VSIFNLSHFD REYAEYLLEE EEAHTVEATS  120
KIFESKEAAT HNPVGRSQFI CTIKQYSLRN GYLRIPNKFA KANGLINKDC GLIIRDERQR  180
SWNLRIYTSC SQVYMGGRWG EFRAANDIKA GDQIMFEVVS NGEQPVWKFH EYFQQEEKEA  240
HTFEETSQKF ELKEVAPHNP FGESQFVCTV KRYYLTNGYL RIPSKFAKEN GLTNKECGLI  300
IRDERQRSWN LRMYTSCHHV CIGGRWRKFC VANDIKVGDQ IMFEVVTSGV QPVWKFHDIT  360
NPCSVEEISK NSEFKDKPNP SVESSRKAFP HVEEAAAHKP SGHSRFVCTI KPYCLTYGYL  420
CLPKEIALRN GLISKKCDLI IRDECQRSWN LILRPFGTSV CIRGGWDEFR DAYCLKEGDH  480
IMFEVVTDGE TPIWKFHGKV SDEIVRSIII EQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24645.13e-46B3 family protein