PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT39906.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HSF

Protein Properties

Length: 505aa MW: 56078.6 Da PI: 4.659

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT39906.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	115.8	2.8e-36	26	117	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl k+y++++d+++++++sws+++nsfvv+d+ efa+++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll++i PHT39906.1 26 FLVKTYDMVDDSSTDKIVSWSATNNSFVVWDPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLLKSIS 113 9******************999*************************************999.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k PHT39906.1 114 RRKP 117 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MESNSSTGAP APTPAPMPSA NAPPPFLVKT YDMVDDSSTD KIVSWSATNN SFVVWDPPEF 60 ARDLLPKYFK HNNFSSFVRQ LNTYGFRKVD PDRWEFANEG FLRGQKHLLK SISRRKPAHG 120 HTQQQQQPHG QNASACVEVG KFGLEEEVER LKRDKNVLMQ ELVRLRQQQQ TTDNQLQGMV 180 QRLQGMEQRQ QQMMSFLAKA VNSPGFLQQF VQQQNESNKR ITEGSKKRRI KQDIVSRDHS 240 VTPADGQIVK YQPMMNEAAK AMLRELSKLD SSPRLENYSN SPESFLDGSP PSNASSTRVS 300 GVTLQEVPPT SGQPLLNTVS AIAGQSMSPS TSEIQSSRIG TSPEIANNQF ADISSLVGSQ 360 DLPPCSLPAS DIIMPELSQL PEILPENDID IIGSEMEHDS FMDTAVGVDG KMPLDIGSFS 420 PDPLEWQTGL LDDIQEFPSV GDPFWEKFLQ SPSPGETEEM ESAVMDDTSN TSATKPQENG 480 WNKTQNMEQL TEQMGLLTSN NKKAI

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MESNSSTGAP APTPAPMPSA NAPPPFLVKT YDMVDDSSTD KIVSWSATNN SFVVWDPPEF  60
ARDLLPKYFK HNNFSSFVRQ LNTYGFRKVD PDRWEFANEG FLRGQKHLLK SISRRKPAHG  120
HTQQQQQPHG QNASACVEVG KFGLEEEVER LKRDKNVLMQ ELVRLRQQQQ TTDNQLQGMV  180
QRLQGMEQRQ QQMMSFLAKA VNSPGFLQQF VQQQNESNKR ITEGSKKRRI KQDIVSRDHS  240
VTPADGQIVK YQPMMNEAAK AMLRELSKLD SSPRLENYSN SPESFLDGSP PSNASSTRVS  300
GVTLQEVPPT SGQPLLNTVS AIAGQSMSPS TSEIQSSRIG TSPEIANNQF ADISSLVGSQ  360
DLPPCSLPAS DIIMPELSQL PEILPENDID IIGSEMEHDS FMDTAVGVDG KMPLDIGSFS  420
PDPLEWQTGL LDDIQEFPSV GDPFWEKFLQ SPSPGETEEM ESAVMDDTSN TSATKPQENG  480
WNKTQNMEQL TEQMGLLTSN NKKAI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	226	231	KKRRIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	1e-122	HSF family protein