PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT39600.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 244aa MW: 27224.2 Da PI: 4.8004 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.3 | 8.9e-19 | 61 | 112 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 s y+GVr++ +++Wv+eIr+pse +kr++lg++ t+e+Aa+a++ +++l+g+ PHT39600.1 61 SIYRGVRRRN-NNKWVCEIREPSE---QKRIWLGTYPTPEMAARAHDVVALALRGN 112 57*****887.8*********976...5*************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MNNNINSISY FSDSSMANLE RDYSQEISSS SSEKSGGGLL LAANRLKKRA GRKKFKETRH 60 SIYRGVRRRN NNKWVCEIRE PSEQKRIWLG TYPTPEMAAR AHDVVALALR GNLAILNFED 120 SSWRLSVPVS KDPKELRQAA MIAANAFHQD SDESVGVDYM NQEVNSDDVG GGGASGSDNN 180 IQNMDILCCN NGGENNEMLE IEGLSWQEKM AEGLLFSPTP RLGSCFSWDD VESDVEVSLW 240 SYNI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G63030.2 | 2e-43 | ERF family protein |