PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT39599.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 246aa MW: 27671.8 Da PI: 4.9055 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.1 | 1.1e-18 | 64 | 114 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr++ +++Wv+eIr+pse +kr++lg++ t+e+Aa+a++ +++l+g+ PHT39599.1 64 IYRGVRRRN-NNKWVCEIREPSE---QKRIWLGTYPTPEMAARAHDVVALALRGN 114 69****887.8*********976...5*************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MNNNNNNNLI SCFSDSSMAN LERDHSQEIS SSSSEKSGGG LLLAANRPKK RAGRKKFKET 60 RHPIYRGVRR RNNNKWVCEI REPSEQKRIW LGTYPTPEMA ARAHDVVALA LRGNLAILNF 120 EDSSWRLSVP VSKDPKELRQ AAMIAANAFH QDSDESVGVD YMNQEINSND VVVDGASGSD 180 NNIQNMNILC CNNWGENNEM LEIEGLSWQE KMAEGLLFSP TPRLGSCFSW DDVESDVEVS 240 LWSYDI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51990.1 | 5e-55 | ERF family protein |