PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT39597.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 202aa MW: 22092.6 Da PI: 4.4556 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 46.3 | 1e-14 | 18 | 66 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r ++ +g+Wv+eIr p gk++r++lg++ t+++Aa+a++ a ++l+g PHT39597.1 18 IYRGIR-CR-SGKWVSEIRQP---GKTTRIWLGTYPTPQMAAAAYDVAVLALKG 66 69***9.55.6*********8...557**********************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MSDLSPTPKS RTNTKHPIYR GIRCRSGKWV SEIRQPGKTT RIWLGTYPTP QMAAAAYDVA 60 VLALKGCQNV VLNFPNHVDS YPKLPPSPSP TDIQRAAATA AEAMAYRGDD DRSLGSSSGG 120 ATCNEGGSVE FPSSSENYAM QIGSTQMVRD EEEYVDEEAL FDFPSLIVNM AEAMMLSPPR 180 INTFPSEDYS SGEFDGESLW SY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 2e-31 | ERF family protein |