PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT39571.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 310aa    MW: 35063.1 Da    PI: 5.7485
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT39571.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.8e-19101151256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr+++ +g+WvAeIr p +   r+r++lg+++ ae Aa a+++a+ kl+ge
  PHT39571.1 101 LYRGVRQRH-WGKWVAEIRLPQN---RTRVWLGTYDNAEAAAYAYDRAAYKLRGE 151
                 59******9.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MSTIQENMSY TYDEAAQIRS SLSQILLTSS TNTLDSIFSH CQEPNNQMST TTSHVLEPLG  60
SSVYLRQKDL LQKFWEQNRT TCSTQTPLQE SLYVSPNKKK LYRGVRQRHW GKWVAEIRLP  120
QNRTRVWLGT YDNAEAAAYA YDRAAYKLRG EYARLNFPNL RDPSELGFGD SAKMNALKNS  180
VDAKIQAICQ KVKRERAKKG VKKIVESEKK VAKTVDLDSS CSSSSLVGSE SWSHSDVISQ  240
SSSDDGFWKS ENSPSSVLGD FPTGLENDDG YITSITHQFE SPMMESEFED CSLERMPSFD  300
PELIWEVLAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.15e-63ERF family protein