PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT39570.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 272aa    MW: 30671.9 Da    PI: 9.4996
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT39570.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY79.43.8e-25105166159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 ldDgy+WrK GqK++ g+ +prsYYrC +    gC ++k+v+rs++dp++ eitY+++H+++
  PHT39570.1 105 LDDGYSWRKNGQKDILGACYPRSYYRCRYWllrGCAATKQVQRSNDDPTISEITYKDTHTCR 166
                 59**************************97788***************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MEHTKQLRTY LSSVSSTSES TPNLLLQKIL SSYEQSLLIL KRTGSTGGAN KPPPASDNRS  60
HRGDDKKRSF KDHPELIDIP KKRKSQPRWT QQVNVRTESG FESPLDDGYS WRKNGQKDIL  120
GACYPRSYYR CRYWLLRGCA ATKQVQRSND DPTISEITYK DTHTCREVTN SALQPKSPEK  180
QANHQGYSPS FASPTATESN YLSVSGSQMN SFGRVHNSNH SKSYLSDIGI IQNLYHSDSD  240
RTYTLSANTS TTSSSIEGMD VQWAEFWQVK VG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16684KKRSFKDHPELIDIPKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.11e-34WRKY family protein