PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT38894.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family HSF
Protein Properties Length: 361aa    MW: 42307.2 Da    PI: 5.231
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT38894.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind115.63e-36371292103
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+ye+++d+++++++sws+ +nsf+v+d+++fa ++Lp+yFkhsnf+SFvRQLn+YgF+kv+ ++         weF+h+ F +g+++ l++i+
    PHT38894.1  37 FLTKTYELVDDQSTNDVVSWSRGNNSFIVWDPQTFAMNLLPRYFKHSNFSSFVRQLNTYGFRKVNPDQ---------WEFAHEGFLRGQRHILKTIR 124
                   9****************************************************************999.........******************** PP

                   XXXXX CS
  HSF_DNA-bind  99 rkkse 103
                   r+k++
    PHT38894.1 125 RRKTS 129
                   **987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MDPNFGPIKE EFLGSNEPTM WIPQPIEGLN ENGPPPFLTK TYELVDDQST NDVVSWSRGN  60
NSFIVWDPQT FAMNLLPRYF KHSNFSSFVR QLNTYGFRKV NPDQWEFAHE GFLRGQRHIL  120
KTIRRRKTSN FHHGQASNQG IDTYVELGKL EIDGEMDRLR REKKHLMMEL VELKQHQQTT  180
KSHIKAMEEK LKRTERKQQQ MMNFLAKAMQ NPKFLEQMMQ QKERRKELEE EIRNKKRRQI  240
DHQGPSNVGD LGHSVDNNDR SFSIKMEPHE YYYGDQIDGF DDLELERSLA MSMQGQSGNT  300
INLEQDYTDI ENEATNEGFW ERLLSENVEG DINLLDIEGE NEEDNVDILA HHLGFLGSTP  360
K
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1224238RRKELEEEIRNKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.11e-113HSF family protein