PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT38862.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | B3 | ||||||||
Protein Properties | Length: 127aa MW: 14459.6 Da PI: 9.2045 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 50.6 | 3.4e-16 | 28 | 108 | 3 | 87 |
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 +++++ ++ ++lp +fa+++g++k++ +++l+de r W+v l + + + +t+GW +F +ngL +gD F+l+++ PHT38862.1 28 VSTIKPYCIRKTEFYLPMDFATSNGLNKQC--EMILKDEAERCWSVWL--GRLGTNFGITRGWTKFRTENGLLVGDAYKFELIKN 108 5567899999999**************877..7***************..999999*************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 127 aa Download sequence |
MKKPSNMSPL NAQVSTSASG DDDHPYFVST IKPYCIRKTE FYLPMDFATS NGLNKQCEMI 60 LKDEAERCWS VWLGRLGTNF GITRGWTKFR TENGLLVGDA YKFELIKNGE IPIAHFHCKY 120 SAKVAKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26680.1 | 4e-16 | B3 family protein |