PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT38839.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | bHLH | ||||||||
Protein Properties | Length: 224aa MW: 25671.1 Da PI: 8.3216 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 23.9 | 7.7e-08 | 81 | 127 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h + Er RR++ +++++ L +llP +K++K +i++ A + I +Lq PHT38839.1 81 KHMIKERIRRENQKQSYSALHKLLPMG-----TKVEKNAIVQTAARRIEELQ 127 68999********************97.....8*****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MEEFFQVSNW FCDDETNNNF VVNQSAFVNF ESKLSEGFGV YSCGNVSTNH RNMNKRAMEF 60 LKKNWISKNG QVKIEKEKGH KHMIKERIRR ENQKQSYSAL HKLLPMGTKV EKNAIVQTAA 120 RRIEELQKYK ENLKKRNDEL EMMILAENDS NKNEEEFEMA KIKAKVNNPI SGIDSMLEVL 180 KCLKNCGAKA NSIQSSFSHQ EFSTIIEIET KGSSSDAGEP PPVP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43650.1 | 2e-40 | bHLH family protein |