PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT38766.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

FAR1

Protein Properties

Length: 757aa MW: 86463.4 Da PI: 6.5695

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT38766.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.9	1.1e-20	59	152	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+++Ak++GFs+r+++++ + + it+r+f+C + g+++ + +++ k +r+r+++r+gC+a +++ k+ +w++t +++ HnHel PHT38766.1 59 EFYCSFAKQCGFSIRRHRTRGKdGVGRGITRRDFTCHRGGYPQLKPSEDGKLQRNRKSSRCGCQAFMRIVKRAdfnVPEWRITGFSNVHNHELL 152 6*************999887455667****************9***************98887676789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 757 aa Download sequence
MTEITNIANE TSENGTDSSQ DDIGTVEEMP EDTILSRQTS VNLVPFIGQR FVSQDAAYEF 60 YCSFAKQCGF SIRRHRTRGK DGVGRGITRR DFTCHRGGYP QLKPSEDGKL QRNRKSSRCG 120 CQAFMRIVKR ADFNVPEWRI TGFSNVHNHE LLRSTEVQLI PACCTMSPDD KSRICMFAKA 180 GMSVRQMLRL MELEKGVKLG CLTFTEVDVR SLLQSFRNVD QDNDPIDLLK LCKEMKDKDP 240 KFKYDYKIDC NNRLEHISWS YASSMRLYEA FGDAIVFDTT HRLDAYDMLL GIWIGVDNHG 300 SHCFFGCVLL REESLQSFSW ALKTFLGFMN GKAPGTILTD QNLWLKEAIA TEIPRVKHAF 360 CIWNIISRFS DWFSTLLGPQ YDNWKAEFHR LYNLHSIEEY EVGWNEMVET YRMDGNKHIA 420 SLYALRSYWA LPFLRSFFFA GMTSTFQSET MNTYIQRILS AQSVLDNFVE QVARVVDAKD 480 QAGAKHKVLR NVQKVFLKTG SPIESHAATV LTPYAFSKLQ EELVFAPQYA SLMVDESYFV 540 VRHHKEMDGG YKVLWVPHDE FISCSCHNFE FTCILCRHVL RVLSTNNCFH IPDQYLPMRW 600 HEFTSSLAKS TLFTLPSDHM GKLQLLQSMI STLINESVET EERLNVVCDE VSTVLSRIKG 660 FPTASNGGNA IAYASPSDSL ILAEVEESEG IGQSFTCNPH ECINLSKLKE RGSRDGLDLY 720 GKRRRFSIPC CGQYGHDAND CPMMEGEDLN GDRLGFL

Sequence ? help Back to Top

Protein Sequence Length: 757 aa Download sequence

MTEITNIANE TSENGTDSSQ DDIGTVEEMP EDTILSRQTS VNLVPFIGQR FVSQDAAYEF  60
YCSFAKQCGF SIRRHRTRGK DGVGRGITRR DFTCHRGGYP QLKPSEDGKL QRNRKSSRCG  120
CQAFMRIVKR ADFNVPEWRI TGFSNVHNHE LLRSTEVQLI PACCTMSPDD KSRICMFAKA  180
GMSVRQMLRL MELEKGVKLG CLTFTEVDVR SLLQSFRNVD QDNDPIDLLK LCKEMKDKDP  240
KFKYDYKIDC NNRLEHISWS YASSMRLYEA FGDAIVFDTT HRLDAYDMLL GIWIGVDNHG  300
SHCFFGCVLL REESLQSFSW ALKTFLGFMN GKAPGTILTD QNLWLKEAIA TEIPRVKHAF  360
CIWNIISRFS DWFSTLLGPQ YDNWKAEFHR LYNLHSIEEY EVGWNEMVET YRMDGNKHIA  420
SLYALRSYWA LPFLRSFFFA GMTSTFQSET MNTYIQRILS AQSVLDNFVE QVARVVDAKD  480
QAGAKHKVLR NVQKVFLKTG SPIESHAATV LTPYAFSKLQ EELVFAPQYA SLMVDESYFV  540
VRHHKEMDGG YKVLWVPHDE FISCSCHNFE FTCILCRHVL RVLSTNNCFH IPDQYLPMRW  600
HEFTSSLAKS TLFTLPSDHM GKLQLLQSMI STLINESVET EERLNVVCDE VSTVLSRIKG  660
FPTASNGGNA IAYASPSDSL ILAEVEESEG IGQSFTCNPH ECINLSKLKE RGSRDGLDLY  720
GKRRRFSIPC CGQYGHDAND CPMMEGEDLN GDRLGFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein