PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT38520.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NF-YB

Protein Properties

Length: 142aa MW: 16286.3 Da PI: 6.2796

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT38520.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	174.5	1.1e-54	20	115	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +eqdr+lPia v+rimk++lP+nakisk+aket+qecvsefisfvt+easdkc++ekrkt+ngdd++wal++lGf+dy+eplk yl++yrelegek PHT38520.1 20 KEQDRLLPIAKVGRIMKHILPQNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALGNLGFDDYAEPLKRYLHRYRELEGEK 115 89********************************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 142 aa Download sequence
MVDRNNVLRS IDSSEEGGIK EQDRLLPIAK VGRIMKHILP QNAKISKEAK ETMQECVSEF 60 ISFVTGEASD KCHKEKRKTV NGDDICWALG NLGFDDYAEP LKRYLHRYRE LEGEKANQNK 120 AATREEREID ELRNLQGSFY GP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47810.1	9e-64	NF-YB family protein