PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT38513.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | bHLH | ||||||||
Protein Properties | Length: 212aa MW: 24371.1 Da PI: 9.9194 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.7 | 3.3e-11 | 41 | 93 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ h +Er RR+++ + + Lr+l+P + ++K s ++ + Av+YIk+Lq PHT38513.1 41 KKVVHRNVERHRRKEMANLVNSLRSLIPIEF--IKGKRSASDHMQVAVNYIKHLQ 93 6788*************************65..*********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MPCQFQTSCD RPYKSPIGTK ITNLDRNNKE GLTRNESNKL KKVVHRNVER HRRKEMANLV 60 NSLRSLIPIE FIKGKRSASD HMQVAVNYIK HLQKNIQELD NTRKNIKNII SLDDQNKSST 120 NITFQKNNIC VTVNKCEDGM EILINVNNSH KEEIFSLSKV LRWLLEEGLN VVSCVNSKQD 180 EWSLIMIQCQ VNNISSGLTL VGLQKKLIDL IN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51790.1 | 8e-30 | bHLH family protein |