PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT38465.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB_related | ||||||||
Protein Properties | Length: 219aa MW: 24710.6 Da PI: 6.1381 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.4 | 1.1e-10 | 95 | 139 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+ E+ ++++ ++G g+Wk+I+r+ +Rt+ q+ s+ qky PHT38465.1 95 SWTELEHRSFLRGLDKYGRGDWKSISRYCVITRTPTQVASHSQKY 139 6***************************9989***********99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MRTDRTCNSS FWTKEEDKIF EITLAIYFKD NNLLRRMVEE LPGKLGDDII NYYNILLEDV 60 EAIDSGRVPI PNYPELQSIS NQNSEADVER QRGASWTELE HRSFLRGLDK YGRGDWKSIS 120 RYCVITRTPT QVASHSQKYF KHLKAVPKKN RRASILDITS ADAEAAGTSQ AMPSTNNESI 180 FPRQSTNAEQ IIAVAGRVPS GHDASFANAM DSMYPDVNG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04760.1 | 2e-45 | MYB family protein |