PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT38464.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB_related

Protein Properties

Length: 690aa MW: 77406.4 Da PI: 4.8909

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT38464.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.9	3e-10	133	177	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+ E+ ++++ ++G g+Wk+I+r +Rt+ q+ s+ qky PHT38464.1 133 SWTELEHRSFLRGLDKYGRGDWKSISRNCVITRTPRQVASHAQKY 177 6************************99989**********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 690 aa Download sequence
MPDIYGCFCD MLKLIRFLNP LQELSLFMFE SFLVDPKKMS TDRTCNSSFW TKDEDKILEN 60 TLAIYSEDKD LFTKMEEALP GKSRDDIINH YNILTEDVEA IDSGRVPLPN YLELQSDSNQ 120 NSRADVEWRR GASWTELEHR SFLRGLDKYG RGDWKSISRN CVITRTPRQV ASHAQKYFKR 180 LQAVPKEKRR ASILDITSAD AEAAGTSQAV PSTKNEIMLP RESINAEQTI AVAEGESSGH 240 DAVFVNGMDS LNPDRNSEFI FSIDDIIMEK EDANETGFLV DAGSSLLPSE QPCAAASTGA 300 YGHPITRIGS DLEALLTEPR EEDNDINSIF VVRKAPTSHE VLLNAAHSGI SSYAAASFDA 360 ENAPEGNVAA YSRMSSYADA SSDAVNAPEN MVAAHSGMTN FAVTSRFASN APQDMVAAHA 420 SQLPPFTLSS NFDVGDAPMM SSYDNCVYFK EISDGLFLYL LLYVDDILIA AKDMREIIKV 480 KAQLSKEFEI KDLKAAKKIL GMEILRDRDT LLEAHFKLLA TLSPKTDDEH DYMSRVPYSS 540 AVGSLMHAMC VPDHIYHLQS VQLAYTWKIL FWRNRDGVIG YVDFNFARDI DKKRNLTGYI 600 FTIGGCVISW KATLQTTVVL STTETECYLF FRSERTKHID VRYHFMREII AHSDIMIRKI 660 SSYDNPADMM TKTLPSSKFE NCLDLVSVNN

Sequence ? help Back to Top

Protein Sequence Length: 690 aa Download sequence

MPDIYGCFCD MLKLIRFLNP LQELSLFMFE SFLVDPKKMS TDRTCNSSFW TKDEDKILEN  60
TLAIYSEDKD LFTKMEEALP GKSRDDIINH YNILTEDVEA IDSGRVPLPN YLELQSDSNQ  120
NSRADVEWRR GASWTELEHR SFLRGLDKYG RGDWKSISRN CVITRTPRQV ASHAQKYFKR  180
LQAVPKEKRR ASILDITSAD AEAAGTSQAV PSTKNEIMLP RESINAEQTI AVAEGESSGH  240
DAVFVNGMDS LNPDRNSEFI FSIDDIIMEK EDANETGFLV DAGSSLLPSE QPCAAASTGA  300
YGHPITRIGS DLEALLTEPR EEDNDINSIF VVRKAPTSHE VLLNAAHSGI SSYAAASFDA  360
ENAPEGNVAA YSRMSSYADA SSDAVNAPEN MVAAHSGMTN FAVTSRFASN APQDMVAAHA  420
SQLPPFTLSS NFDVGDAPMM SSYDNCVYFK EISDGLFLYL LLYVDDILIA AKDMREIIKV  480
KAQLSKEFEI KDLKAAKKIL GMEILRDRDT LLEAHFKLLA TLSPKTDDEH DYMSRVPYSS  540
AVGSLMHAMC VPDHIYHLQS VQLAYTWKIL FWRNRDGVIG YVDFNFARDI DKKRNLTGYI  600
FTIGGCVISW KATLQTTVVL STTETECYLF FRSERTKHID VRYHFMREII AHSDIMIRKI  660
SSYDNPADMM TKTLPSSKFE NCLDLVSVNN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08520.1	2e-43	MYB family protein