PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT38231.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | Trihelix | ||||||||
Protein Properties | Length: 293aa MW: 34423.8 Da PI: 7.7109 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 79.5 | 4.9e-25 | 47 | 129 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ qe+++ + +r e+++++ ++k++k lWe ++ km+e+g++rsp+qCk+kw+nl +ryk +++ e + ++++p++++l+ PHT38231.1 47 QWSIQETRDFLMIRAELDQTFMETKRNKLLWEVIATKMKEKGYNRSPEQCKCKWKNLVTRYKGCETLEPEA--L-RQQFPFYNELQ 129 7********************************************************************95..3.4589*****98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 293 aa Download sequence |
MDPHLHHHHH QHHQQQPQHQ FSHHQSVNID TTGGGVNIGG GADRFPQWSI QETRDFLMIR 60 AELDQTFMET KRNKLLWEVI ATKMKEKGYN RSPEQCKCKW KNLVTRYKGC ETLEPEALRQ 120 QFPFYNELQA IFAARMQRML WIEAEGGGGG GASGSKKKAI SSDEEEENED SEGEKVGKKK 180 RKIKGNIFGC SSGGSGNNLV SSFKEIFDDF MKQQMAMEMQ WLKAFEAKEE ERRIKEMEWR 240 QTMEALENER LMMERRWRER EDQRRVREEA RAEKKDALIT ALLNNLRRED HNM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G01380.1 | 1e-52 | Trihelix family protein |