PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT38231.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Trihelix
Protein Properties Length: 293aa    MW: 34423.8 Da    PI: 7.7109
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT38231.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix79.54.9e-2547129186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W+ qe+++ + +r e+++++ ++k++k lWe ++ km+e+g++rsp+qCk+kw+nl +ryk +++ e +     ++++p++++l+
  PHT38231.1  47 QWSIQETRDFLMIRAELDQTFMETKRNKLLWEVIATKMKEKGYNRSPEQCKCKWKNLVTRYKGCETLEPEA--L-RQQFPFYNELQ 129
                 7********************************************************************95..3.4589*****98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MDPHLHHHHH QHHQQQPQHQ FSHHQSVNID TTGGGVNIGG GADRFPQWSI QETRDFLMIR  60
AELDQTFMET KRNKLLWEVI ATKMKEKGYN RSPEQCKCKW KNLVTRYKGC ETLEPEALRQ  120
QFPFYNELQA IFAARMQRML WIEAEGGGGG GASGSKKKAI SSDEEEENED SEGEKVGKKK  180
RKIKGNIFGC SSGGSGNNLV SSFKEIFDDF MKQQMAMEMQ WLKAFEAKEE ERRIKEMEWR  240
QTMEALENER LMMERRWRER EDQRRVREEA RAEKKDALIT ALLNNLRRED HNM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01380.11e-52Trihelix family protein