PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT38122.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 336aa    MW: 38420.5 Da    PI: 9.9852
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT38122.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.94.5e-12208249351
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                  +GV++  k+ +W A I++      +k+++lg+ gt eeAa+++++a+ 
  PHT38122.1 208 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGTQEEAARLYDRAAF 249
                 79**98..47*********4.....5********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MRVEIKTKGG RCMSNNNNNY YNYKHHLHPF LSLFLPHPLH NLSSPPSPPL PPFKLKDPSS  60
FHQNLPFQIL GFLGFHAPPT TLPSSSYYSL VVVLRHNLAN AMVSIRRRKL LGLCSGRSAF  120
LVPLPKFSEN DHFAEHRFFN NRPTSVHPMT STDIDESKEK IAIKVVPGTS NSHASGSLME  180
QTAQQFPEVK RRKRHRRKHF ENQEPCLMRG VYFKNMKWQA AIKVDKKQIH LGTVGTQEEA  240
ARLYDRAAFM CGREPNFELS EEEKQELRQF KWDDFLAFTR SAITNKKTRR RSGAGARRKS  300
EPLTSALNSE EEEEGGEPES NGFSASEDIE HDVSFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.14e-45ERF family protein