PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT37933.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Trihelix
Protein Properties Length: 289aa    MW: 33938.4 Da    PI: 7.9973
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT37933.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix79.54.8e-2543125186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W+ qe+++ + +r e+++++ ++k++k lWe ++ km+e+g++rsp+qCk+kw+nl +ryk +++ e +     ++++p++++l+
  PHT37933.1  43 QWSIQETRDFLMIRAELDQTFMETKRNKLLWEVIATKMKEKGYNRSPEQCKCKWKNLVTRYKGCETLEPEA--L-RQQFPFYNELQ 125
                 7********************************************************************95..3.4589*****98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MDPHLHQRHQ QQPQHQFSHH QSVNIDTTGG GVNIGGGADR FPQWSIQETR DFLMIRAELD  60
QTFMETKRNK LLWEVIATKM KEKGYNRSPE QCKCKWKNLV TRYKGCETLE PEALRQQFPF  120
YNELQAIFAA RMQRMLWIEA EGGGGGGASG SKKKAISSDE EEENEDSEGE KVGKKKRKIK  180
GNIFGCSSGG SGNNLVSSFK EIFDDFMKQQ MAMEMQWLKA FDAKEEERRI KEMEWRQTME  240
ALENERLMME RRWREREDQR RVREEDRAEK KDALITALLN KLRREDHNM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01380.11e-52Trihelix family protein