PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT37838.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 245aa MW: 28426.9 Da PI: 8.3663 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.2 | 7.7e-20 | 70 | 122 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + +++++qle Le+ F+++ +++ +++ +LAk+lgL+ rq+ vWFqNrRa++k PHT37838.1 70 KKRLSSDQLESLENSFQEEIKLDPDRKMKLAKELGLQPRQIAVWFQNRRARWK 122 55699***********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 120.1 | 1.1e-38 | 69 | 160 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kk+rls++q+++LE+sF+ee kL+p+rK++la+eLglqprq+avWFqnrRAR+k+kqlE+ y++Lk+ yd +++e+++L++ev +Lr+ lke PHT37838.1 69 KKKRLSSDQLESLENSFQEEIKLDPDRKMKLAKELGLQPRQIAVWFQNRRARWKAKQLERLYDSLKQDYDVVSREKQKLQDEVLALRAILKE 160 9**************************************************************************************88875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MDWNGNIRPF VSRPILDNSL NFLYSYNYDQ YPGMEMKHAM QTQHGGVPLP TMDNNNNNNF 60 VFNQHQLDKK KRLSSDQLES LENSFQEEIK LDPDRKMKLA KELGLQPRQI AVWFQNRRAR 120 WKAKQLERLY DSLKQDYDVV SREKQKLQDE VLALRAILKE QATKKQVNST VYTEISGEET 180 VESTSMPSSN KTITRAITTS SHQNNNIINN NNNNSNMAEC SYVYNVVDGL NPVMPPYWAS 240 LPTYP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 69 | 98 | KKKRLSSDQLESLENSFQEEIKLDPDRKMK |
2 | 117 | 125 | RRARWKAKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03790.1 | 2e-54 | HD-ZIP family protein |