PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT37672.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family E2F/DP
Protein Properties Length: 261aa    MW: 29424.6 Da    PI: 7.6404
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT37672.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP65.66.5e-2159138471
     E2F_TDP   4 ksLrlltqkflklleksee.givtlnevakeLvse...............dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                  +Lr+++ +   +++k+e+ g++t+ eva+e+++e               d+kn rRR+YD lNVL+al++ie+ +++ei+wkg
  PHT37672.1  59 GGLRQYSIM---VCKKVEDkGRITYGEVADEIIAEfmatdsnssvpisesDEKNVRRRVYDSLNVLMALDVIER-DRKEIHWKG 138
                 688888888...**************************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MMDVKTSAST FEGFNQRCSK GKSSFRATTG CDDKFLHVKQ HAQTSDTAKL KKGSKIVEGG  60
LRQYSIMVCK KVEDKGRITY GEVADEIIAE FMATDSNSSV PISESDEKNV RRRVYDSLNV  120
LMALDVIERD RKEIHWKGLP NSDARDMEEI KMLHAELMAK IGKKAAYLQD LEEQLANLQN  180
LKLRNEKLCK STKGSSQGVS LPFVLVQTAR HAKLNIEISE DNQLVHFDFE SFIFTLHDDA  240
DVLKLMRHHG LLESKSVSPT S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.12e-72E2F/DP family protein