PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT37623.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TALE

Protein Properties

Length: 521aa MW: 57768.5 Da PI: 7.1139

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT37623.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.9	2e-09	319	351	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yp+ +++ LAk++gL+ +qV++WF N R + PHT37623.1 319 HPYPTDTDKVMLAKQTGLSRNQVSNWFINARVR 351 89*****************************88 PP
2	BELL	101.1	8.6e-33	188	256	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 + kkk++L+s+l+eV+++Y qy+eqlq+v++sFe vag+g+a+p++++A k++S+hF+cLkdai++q+ PHT37623.1 188 QFGKKKTRLISMLDEVYQKYTQYNEQLQIVVASFESVAGIGNAAPFANIAIKTMSKHFKCLKDAITDQL 256 5679**************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 521 aa Download sequence
MAEGFEPYHV PQQSRRDKLR VLLDDNNSNS SSLQLQNCQV PLYDPSIVLP SDLSIFQEIN 60 VNPFLYTPQI PRFLDQSVTI AHNNNSNSNT NGQGNLSLSL SSLHHASSST ANNNDLSSKS 120 ITTTTNCVPL GPFTGYSLIL KRSKFLKPAQ ILLEELCDVG KGFYVVDDDD DSTLVMHPPQ 180 ACSNGDEQFG KKKTRLISML DEVYQKYTQY NEQLQIVVAS FESVAGIGNA APFANIAIKT 240 MSKHFKCLKD AITDQLQFTT TSKSSSHHHG QINCERVGIS GKGMYCQKQE TQPVWRPQRG 300 LPERAVTVLR AWLFDHFLHP YPTDTDKVML AKQTGLSRNQ VSNWFINARV RLWKPMVEEI 360 HMLETREADN KSSQREGQNN NNNHNNNPNE HFPMNNSHAC ESSTPSTSTP RLLDVPSKRT 420 RNDLANIPNN IGGIADSINL SYGNMSTGVG GGVSLTLGLH QNSGNIGLSE PFPINAARRF 480 GIESNTNSTG RFMFGAFDEQ NGQFGRNNTM VGGQFLHDFA G

Sequence ? help Back to Top

Protein Sequence Length: 521 aa Download sequence

MAEGFEPYHV PQQSRRDKLR VLLDDNNSNS SSLQLQNCQV PLYDPSIVLP SDLSIFQEIN  60
VNPFLYTPQI PRFLDQSVTI AHNNNSNSNT NGQGNLSLSL SSLHHASSST ANNNDLSSKS  120
ITTTTNCVPL GPFTGYSLIL KRSKFLKPAQ ILLEELCDVG KGFYVVDDDD DSTLVMHPPQ  180
ACSNGDEQFG KKKTRLISML DEVYQKYTQY NEQLQIVVAS FESVAGIGNA APFANIAIKT  240
MSKHFKCLKD AITDQLQFTT TSKSSSHHHG QINCERVGIS GKGMYCQKQE TQPVWRPQRG  300
LPERAVTVLR AWLFDHFLHP YPTDTDKVML AKQTGLSRNQ VSNWFINARV RLWKPMVEEI  360
HMLETREADN KSSQREGQNN NNNHNNNPNE HFPMNNSHAC ESSTPSTSTP RLLDVPSKRT  420
RNDLANIPNN IGGIADSINL SYGNMSTGVG GGVSLTLGLH QNSGNIGLSE PFPINAARRF  480
GIESNTNSTG RFMFGAFDEQ NGQFGRNNTM VGGQFLHDFA G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	6e-91	TALE family protein